Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G3Q9Y6M4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 AC239809.2-201ENST00000415381 517 ntBASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 AC110285.5-201ENST00000611501 352 ntBASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 AL023875.1-201ENST00000640777 796 ntBASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSNK1G3Q9Y6M4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 AC233702.5-201ENST00000584107 538 ntBASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CSNK1G3Q9Y6M4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 AL135905.2-201ENST00000584934 1404 ntBASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 RPS2P55-201ENST00000397318 883 ntBASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 AC107956.1-201ENST00000494359 873 ntBASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 AP001412.1-201ENST00000608405 714 ntBASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSNK1G3Q9Y6M4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 SNORA78-201ENST00000459373 127 ntBASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 AC023632.3-201ENST00000521633 145 ntBASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 AC027702.1-201ENST00000563810 1770 ntBASIC19.78■□□□□ 0.76
CSNK1G3Q9Y6M4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSNK1G3Q9Y6M4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSNK1G3Q9Y6M4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms