Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 AL162377.1-201ENST00000618844 1793 ntBASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA11Q9Y5H2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 AL512408.1-201ENST00000569378 2000 ntBASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 CNN2P6-201ENST00000439038 900 ntBASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 AC022517.1-201ENST00000592429 346 ntBASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 AC016405.3-201ENST00000607710 860 ntBASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA11Q9Y5H2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 PCDHAC2-203ENST00000615316 3011 ntBASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 AC068338.2-201ENST00000563278 1430 ntBASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 AC087633.2-202ENST00000565166 1439 ntBASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 AC231657.2-201ENST00000624556 255 ntBASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA11Q9Y5H2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms