Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 RBM17P2-201ENST00000616397 1405 ntBASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGB3Q9Y5G1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 AL512408.1-201ENST00000569378 2000 ntBASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 HLA-L-209ENST00000420110 1011 ntBASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGB3Q9Y5G1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 CROCCP5-201ENST00000436658 830 ntBASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 AC006970.2-201ENST00000450065 779 ntBASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 UBE2DNL-204ENST00000602536 740 ntBASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 MYCNOS-205ENST00000641950 531 ntBASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGB3Q9Y5G1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 NCF1B-203ENST00000435988 1254 ntBASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 CDV3P1-201ENST00000471403 739 ntBASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGB3Q9Y5G1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms