Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 AC020907.5-201ENST00000624372 1936 ntBASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 AP005212.1-201ENST00000581547 1997 ntBASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC4Q9Y5F7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PCDHGC4Q9Y5F7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 DPP3P2-201ENST00000416030 1696 ntBASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC4Q9Y5F7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 LINC01006-201ENST00000333319 2292 ntBASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGC4Q9Y5F7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 KRT18P6-201ENST00000555540 1265 ntBASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 SMG8-203ENST00000578922 2178 ntBASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGC4Q9Y5F7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms