Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 AC087633.2-202ENST00000565166 1439 ntBASIC19.11■□□□□ 0.65
LHX6Q9UPM6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 HTR7P1-201ENST00000538670 1336 ntBASIC19.11■□□□□ 0.65
LHX6Q9UPM6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 LINC01238-205ENST00000567549 1107 ntBASIC19.11■□□□□ 0.65
LHX6Q9UPM6 AC006011.2-201ENST00000621313 1158 ntBASIC19.11■□□□□ 0.65
LHX6Q9UPM6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX6Q9UPM6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.1■□□□□ 0.65
LHX6Q9UPM6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 AC009947.2-201ENST00000444014 672 ntBASIC19.1■□□□□ 0.65
LHX6Q9UPM6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX6Q9UPM6 SLC25A24-204ENST00000569674 2357 ntBASIC19.1■□□□□ 0.65
LHX6Q9UPM6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 AL353807.1-201ENST00000427475 662 ntBASIC19.09■□□□□ 0.65
LHX6Q9UPM6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 AC010947.1-201ENST00000623454 693 ntBASIC19.09■□□□□ 0.65
LHX6Q9UPM6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX6Q9UPM6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.65
LHX6Q9UPM6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 AC010203.1-204ENST00000548782 407 ntBASIC19.08■□□□□ 0.64
LHX6Q9UPM6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.08■□□□□ 0.64
LHX6Q9UPM6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms