Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA4Q9UN74 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 PTBP1P-201ENST00000554374 1601 ntBASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHA4Q9UN74 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 AC097658.1-201ENST00000475555 843 ntBASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA4Q9UN74 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA4Q9UN74 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA4Q9UN74 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA4Q9UN74 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHA4Q9UN74 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA4Q9UN74 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 AC083880.1-201ENST00000608266 535 ntBASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHA4Q9UN74 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA4Q9UN74 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA4Q9UN74 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms