Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 MIR4785-201ENST00000585005 73 ntBASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 KRT17P2-201ENST00000300992 1314 ntBASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.56■□□□□ 0.08
NOTCH3Q9UM47 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 RARRES2P10-201ENST00000564312 460 ntBASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 C2orf69P4-201ENST00000565394 541 ntBASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 AC124016.1-201ENST00000609552 612 ntBASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 AC105020.6-201ENST00000621523 1217 ntBASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NOTCH3Q9UM47 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms