Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 AC027612.3-201ENST00000413684 1047 ntBASIC19.97■□□□□ 0.79
MKS1Q9NXB0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 AC104187.1-201ENST00000607510 612 ntBASIC19.97■□□□□ 0.79
MKS1Q9NXB0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKS1Q9NXB0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 SLC7A5P1-201ENST00000568957 537 ntBASIC19.96■□□□□ 0.79
MKS1Q9NXB0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MKS1Q9NXB0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MKS1Q9NXB0 AC008406.3-201ENST00000620001 1374 ntBASIC19.95■□□□□ 0.78
MKS1Q9NXB0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 AC105265.2-201ENST00000467189 838 ntBASIC19.94■□□□□ 0.78
MKS1Q9NXB0 AC131212.1-201ENST00000613771 668 ntBASIC19.94■□□□□ 0.78
MKS1Q9NXB0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MKS1Q9NXB0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 AC009237.14-201ENST00000609975 1594 ntBASIC19.93■□□□□ 0.78
MKS1Q9NXB0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MKS1Q9NXB0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms