Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 AC007322.3-201ENST00000426526 701 ntBASIC18.8■□□□□ 0.6
RLIMQ9NVW2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RLIMQ9NVW2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 AC026271.2-201ENST00000428091 497 ntBASIC18.79■□□□□ 0.6
RLIMQ9NVW2 KRT18P5-201ENST00000436075 1291 ntBASIC18.79■□□□□ 0.6
RLIMQ9NVW2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.79■□□□□ 0.6
RLIMQ9NVW2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 AC125437.2-201ENST00000625180 2167 ntBASIC18.78■□□□□ 0.6
RLIMQ9NVW2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RLIMQ9NVW2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RLIMQ9NVW2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms