Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 IRS3P-201ENST00000223076 1006 ntBASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 AC092720.2-201ENST00000602388 1665 ntBASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB16Q9NRJ7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB16Q9NRJ7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB16Q9NRJ7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB16Q9NRJ7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
PCDHB16Q9NRJ7 AC116050.2-201ENST00000612102 1779 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 LINC02228-203ENST00000641970 1355 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L2-201ENST00000561772 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L6-201ENST00000626483 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L1-201ENST00000627662 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L8-201ENST00000629013 1275 ntBASIC17.45■□□□□ 0.38
PCDHB16Q9NRJ7 DUX4L3-201ENST00000630187 1275 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms