Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLK4Q9HAZ1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 AC073314.1-201ENST00000568729 2216 ntBASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 FAM21FP-204ENST00000608637 956 ntBASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLK4Q9HAZ1 AC068338.2-201ENST00000563278 1430 ntBASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLK4Q9HAZ1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLK4Q9HAZ1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLK4Q9HAZ1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CLK4Q9HAZ1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 AC133552.2-202ENST00000575694 574 ntBASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 AC005181.1-201ENST00000604782 1256 ntBASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 OR10C1-204ENST00000622521 1039 ntBASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLK4Q9HAZ1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 AC116050.2-201ENST00000612102 1779 ntBASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 AC069236.1-201ENST00000604339 616 ntBASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLK4Q9HAZ1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms