Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SOX17Q9H6I2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SOX17Q9H6I2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 AL512625.2-201ENST00000417533 625 ntBASIC19.55■□□□□ 0.72
SOX17Q9H6I2 BX276092.2-201ENST00000417668 665 ntBASIC19.55■□□□□ 0.72
SOX17Q9H6I2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 AL162412.1-201ENST00000567129 965 ntBASIC19.55■□□□□ 0.72
SOX17Q9H6I2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX17Q9H6I2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 MIR4758-201ENST00000577688 71 ntBASIC19.54■□□□□ 0.72
SOX17Q9H6I2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SOX17Q9H6I2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CD99P1-205ENST00000527459 561 ntBASIC19.53■□□□□ 0.72
SOX17Q9H6I2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX17Q9H6I2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 AC010980.2-201ENST00000587099 1412 ntBASIC19.52■□□□□ 0.72
SOX17Q9H6I2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 CDV3P1-201ENST00000471403 739 ntBASIC19.52■□□□□ 0.72
SOX17Q9H6I2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 KRT18P6-201ENST00000555540 1265 ntBASIC19.52■□□□□ 0.72
SOX17Q9H6I2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX17Q9H6I2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
SOX17Q9H6I2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.52■□□□□ 0.71
SOX17Q9H6I2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms