Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 AC091799.1-201ENST00000422823 811 ntBASIC20.76■□□□□ 0.91
TRABDQ9H4I3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 AC007322.4-201ENST00000509611 723 ntBASIC20.76■□□□□ 0.91
TRABDQ9H4I3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 AL137784.2-201ENST00000607332 1000 ntBASIC20.75■□□□□ 0.91
TRABDQ9H4I3 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 AC092437.1-201ENST00000624794 1048 ntBASIC20.75■□□□□ 0.91
TRABDQ9H4I3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 AC011484.1-201ENST00000377652 1995 ntBASIC20.75■□□□□ 0.91
TRABDQ9H4I3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.75■□□□□ 0.91
TRABDQ9H4I3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 DUX4L16-201ENST00000555130 1264 ntBASIC20.74■□□□□ 0.91
TRABDQ9H4I3 AL162412.1-201ENST00000567129 965 ntBASIC20.74■□□□□ 0.91
TRABDQ9H4I3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 AC116050.2-201ENST00000612102 1779 ntBASIC20.74■□□□□ 0.91
TRABDQ9H4I3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.74■□□□□ 0.91
TRABDQ9H4I3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.73■□□□□ 0.91
TRABDQ9H4I3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.73■□□□□ 0.91
TRABDQ9H4I3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 CDV3P1-201ENST00000471403 739 ntBASIC20.72■□□□□ 0.91
TRABDQ9H4I3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 AL591742.1-201ENST00000604433 565 ntBASIC20.72■□□□□ 0.91
TRABDQ9H4I3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 AC231657.2-201ENST00000624556 255 ntBASIC20.72■□□□□ 0.91
TRABDQ9H4I3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRABDQ9H4I3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRABDQ9H4I3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRABDQ9H4I3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.71■□□□□ 0.91
TRABDQ9H4I3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRABDQ9H4I3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRABDQ9H4I3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.71■□□□□ 0.91
TRABDQ9H4I3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms