Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC120498.10-201ENST00000621827 505 ntBASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 AC010141.2-201ENST00000452426 721 ntBASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 AC091305.1-201ENST00000479476 895 ntBASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 AL355001.2-201ENST00000620617 1191 ntBASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 TNXA-203ENST00000507684 2038 ntBASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDC42EP4Q9H3Q1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 TREX1-205ENST00000625293 1783 ntBASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 AC093484.2-201ENST00000580996 2166 ntBASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDC42EP4Q9H3Q1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.54■□□□□ 0.88
CDC42EP4Q9H3Q1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42EP4Q9H3Q1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms