Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
VCX3BQ9H321 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VCX3BQ9H321 RNF126P1-201ENST00000567452 1320 ntBASIC19.25■□□□□ 0.67
VCX3BQ9H321 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 AC079598.2-202ENST00000546624 1451 ntBASIC19.24■□□□□ 0.67
VCX3BQ9H321 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 AC010141.3-201ENST00000456659 717 ntBASIC19.24■□□□□ 0.67
VCX3BQ9H321 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 AC093484.2-201ENST00000580996 2166 ntBASIC19.24■□□□□ 0.67
VCX3BQ9H321 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VCX3BQ9H321 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
VCX3BQ9H321 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 AC005332.8-201ENST00000622750 2735 ntBASIC19.23■□□□□ 0.67
VCX3BQ9H321 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.23■□□□□ 0.67
VCX3BQ9H321 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VCX3BQ9H321 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 Z82202.1-201ENST00000623446 1880 ntBASIC19.22■□□□□ 0.67
VCX3BQ9H321 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.22■□□□□ 0.67
VCX3BQ9H321 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.22■□□□□ 0.67
VCX3BQ9H321 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 Z92544.1-202ENST00000571933 1220 ntBASIC19.22■□□□□ 0.67
VCX3BQ9H321 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
VCX3BQ9H321 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
VCX3BQ9H321 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.22■□□□□ 0.67
VCX3BQ9H321 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 TMEM179-206ENST00000616017 1645 ntBASIC19.22■□□□□ 0.67
VCX3BQ9H321 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VCX3BQ9H321 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 AP006587.3-201ENST00000525742 1516 ntBASIC19.21■□□□□ 0.67
VCX3BQ9H321 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 MIR7108-201ENST00000614319 87 ntBASIC19.21■□□□□ 0.67
VCX3BQ9H321 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.21■□□□□ 0.67
VCX3BQ9H321 AC011484.1-201ENST00000377652 1995 ntBASIC19.21■□□□□ 0.67
VCX3BQ9H321 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCX3BQ9H321 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCX3BQ9H321 AC133637.1-201ENST00000624115 1537 ntBASIC19.2■□□□□ 0.66
VCX3BQ9H321 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms