Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLC7A5P2-201ENST00000553010 536 ntBASIC20.29■□□□□ 0.84
VPS11Q9H270 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS11Q9H270 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS11Q9H270 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS11Q9H270 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS11Q9H270 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
VPS11Q9H270 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS11Q9H270 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS11Q9H270 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.28■□□□□ 0.84
VPS11Q9H270 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.28■□□□□ 0.84
VPS11Q9H270 AC104187.1-201ENST00000607510 612 ntBASIC20.28■□□□□ 0.84
VPS11Q9H270 MIR2861-201ENST00000636310 90 ntBASIC20.28■□□□□ 0.84
VPS11Q9H270 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 AC098818.2-201ENST00000564925 2320 ntBASIC20.28■□□□□ 0.84
VPS11Q9H270 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS11Q9H270 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VPS11Q9H270 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS11Q9H270 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS11Q9H270 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS11Q9H270 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VPS11Q9H270 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 AC027612.3-201ENST00000413684 1047 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L2-201ENST00000561772 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L6-201ENST00000626483 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L1-201ENST00000627662 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L8-201ENST00000629013 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L3-201ENST00000630187 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L7-201ENST00000630678 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 DUX4L5-201ENST00000630834 1275 ntBASIC20.27■□□□□ 0.84
VPS11Q9H270 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VPS11Q9H270 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS11Q9H270 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VPS11Q9H270 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
VPS11Q9H270 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VPS11Q9H270 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 LINC02228-203ENST00000641970 1355 ntBASIC20.26■□□□□ 0.83
VPS11Q9H270 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.26■□□□□ 0.83
VPS11Q9H270 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS11Q9H270 AC005837.3-201ENST00000612163 286 ntBASIC20.26■□□□□ 0.83
VPS11Q9H270 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS11Q9H270 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VPS11Q9H270 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VPS11Q9H270 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VPS11Q9H270 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VPS11Q9H270 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.26■□□□□ 0.83
VPS11Q9H270 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 AL158211.5-201ENST00000623583 2518 ntBASIC20.25■□□□□ 0.83
VPS11Q9H270 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VPS11Q9H270 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.25■□□□□ 0.83
VPS11Q9H270 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS11Q9H270 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.25■□□□□ 0.83
VPS11Q9H270 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VPS11Q9H270 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.25■□□□□ 0.83
VPS11Q9H270 AP001160.3-201ENST00000601484 763 ntBASIC20.25■□□□□ 0.83
VPS11Q9H270 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VPS11Q9H270 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.25■□□□□ 0.83
VPS11Q9H270 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS11Q9H270 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS11Q9H270 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
VPS11Q9H270 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VPS11Q9H270 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.25■□□□□ 0.83
VPS11Q9H270 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VPS11Q9H270 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms