Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CNTNAP4Q9C0A0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CNTNAP4Q9C0A0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CNTNAP4Q9C0A0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
CNTNAP4Q9C0A0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CNTNAP4Q9C0A0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNTNAP4Q9C0A0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 FITM1-202ENST00000559294 800 ntBASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 LINC01568-207ENST00000641790 1380 ntBASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CNTNAP4Q9C0A0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 NIFKP9-201ENST00000419265 221 ntBASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 CYP2D8P-201ENST00000433633 1490 ntBASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 AC073508.3-201ENST00000619697 1419 ntBASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
CNTNAP4Q9C0A0 TERF1P1-201ENST00000311003 1181 ntBASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 AC010947.1-201ENST00000623454 693 ntBASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNTNAP4Q9C0A0 AL390955.1-201ENST00000428694 934 ntBASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 KRT18P57-201ENST00000443599 1254 ntBASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 KSR1P1-201ENST00000446298 240 ntBASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.64■■□□□ 1.7
CNTNAP4Q9C0A0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.64■■□□□ 1.69
CNTNAP4Q9C0A0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.64■■□□□ 1.69
CNTNAP4Q9C0A0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.64■■□□□ 1.69
CNTNAP4Q9C0A0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CNTNAP4Q9C0A0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 NAPSB-206ENST00000562112 1266 ntBASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNTNAP4Q9C0A0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms