Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCM2Q9BSQ5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCM2Q9BSQ5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AC073314.1-201ENST00000568729 2216 ntBASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AC020907.5-201ENST00000624372 1936 ntBASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 MYC-209ENST00000641252 345 ntBASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.89■□□□□ 0.77
CCM2Q9BSQ5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 AP005212.1-201ENST00000581547 1997 ntBASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCM2Q9BSQ5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCM2Q9BSQ5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.86■□□□□ 0.77
CCM2Q9BSQ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 AC073130.3-201ENST00000624389 2278 ntBASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms