Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.46□□□□□ -0.25
LITAFQ99732 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LITAFQ99732 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LITAFQ99732 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LITAFQ99732 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.46□□□□□ -0.25
LITAFQ99732 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LITAFQ99732 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.46□□□□□ -0.25
LITAFQ99732 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LITAFQ99732 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.46□□□□□ -0.25
LITAFQ99732 NTF6A-201ENST00000591175 560 ntBASIC13.46□□□□□ -0.25
LITAFQ99732 AC099791.2-201ENST00000605725 427 ntBASIC13.46□□□□□ -0.25
LITAFQ99732 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LITAFQ99732 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
LITAFQ99732 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.46□□□□□ -0.25
LITAFQ99732 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LITAFQ99732 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LITAFQ99732 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LITAFQ99732 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LITAFQ99732 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LITAFQ99732 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LITAFQ99732 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.45□□□□□ -0.26
LITAFQ99732 AC020916.1-201ENST00000587762 1774 ntBASIC13.45□□□□□ -0.26
LITAFQ99732 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 YBX1P4-201ENST00000392794 808 ntBASIC13.45□□□□□ -0.26
LITAFQ99732 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LITAFQ99732 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.45□□□□□ -0.26
LITAFQ99732 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.45□□□□□ -0.26
LITAFQ99732 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.45□□□□□ -0.26
LITAFQ99732 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LITAFQ99732 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LITAFQ99732 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.44□□□□□ -0.26
LITAFQ99732 AP005435.1-201ENST00000529293 1178 ntBASIC13.44□□□□□ -0.26
LITAFQ99732 MIR2861-201ENST00000636310 90 ntBASIC13.44□□□□□ -0.26
LITAFQ99732 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 KRT8P33-201ENST00000508125 1423 ntBASIC13.44□□□□□ -0.26
LITAFQ99732 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 AL390961.4-201ENST00000623958 2535 ntBASIC13.44□□□□□ -0.26
LITAFQ99732 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.44□□□□□ -0.26
LITAFQ99732 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LITAFQ99732 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LITAFQ99732 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 AC009113.1-201ENST00000570267 2443 ntBASIC13.43□□□□□ -0.26
LITAFQ99732 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms