Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC006538.3-201ENST00000612495 578 ntBASIC20.48■□□□□ 0.87
PHOX2BQ99453 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHOX2BQ99453 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHOX2BQ99453 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PHOX2BQ99453 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHOX2BQ99453 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHOX2BQ99453 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PHOX2BQ99453 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHOX2BQ99453 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 EP400NL-214ENST00000641289 2402 ntBASIC20.47■□□□□ 0.87
PHOX2BQ99453 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 AC027702.1-201ENST00000563810 1770 ntBASIC20.47■□□□□ 0.87
PHOX2BQ99453 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 AP000593.1-201ENST00000393668 712 ntBASIC20.47■□□□□ 0.87
PHOX2BQ99453 PVRIG2P-201ENST00000435460 978 ntBASIC20.47■□□□□ 0.87
PHOX2BQ99453 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.47■□□□□ 0.87
PHOX2BQ99453 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHOX2BQ99453 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 AL031133.1-201ENST00000406807 723 ntBASIC20.46■□□□□ 0.87
PHOX2BQ99453 AK4P3-201ENST00000418260 669 ntBASIC20.46■□□□□ 0.87
PHOX2BQ99453 LIN28AP1-201ENST00000429574 405 ntBASIC20.46■□□□□ 0.87
PHOX2BQ99453 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 FITM1-202ENST00000559294 800 ntBASIC20.46■□□□□ 0.87
PHOX2BQ99453 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHOX2BQ99453 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
PHOX2BQ99453 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.45■□□□□ 0.87
PHOX2BQ99453 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PHOX2BQ99453 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 ATP5G1P1-201ENST00000448724 379 ntBASIC20.45■□□□□ 0.86
PHOX2BQ99453 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.45■□□□□ 0.86
PHOX2BQ99453 AC093458.2-201ENST00000623150 629 ntBASIC20.45■□□□□ 0.86
PHOX2BQ99453 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHOX2BQ99453 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.44■□□□□ 0.86
PHOX2BQ99453 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHOX2BQ99453 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.44■□□□□ 0.86
PHOX2BQ99453 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHOX2BQ99453 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHOX2BQ99453 AC063952.2-201ENST00000498792 1227 ntBASIC20.44■□□□□ 0.86
PHOX2BQ99453 CLEC4GP1-201ENST00000596555 870 ntBASIC20.44■□□□□ 0.86
PHOX2BQ99453 AL121906.2-201ENST00000621597 723 ntBASIC20.44■□□□□ 0.86
PHOX2BQ99453 AP000550.4-202ENST00000639755 178 ntBASIC20.44■□□□□ 0.86
PHOX2BQ99453 MYC-208ENST00000641036 567 ntBASIC20.44■□□□□ 0.86
PHOX2BQ99453 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PHOX2BQ99453 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.43■□□□□ 0.86
PHOX2BQ99453 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AC246785.2-201ENST00000432512 513 ntBASIC20.43■□□□□ 0.86
PHOX2BQ99453 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AC005829.2-201ENST00000571422 1056 ntBASIC20.43■□□□□ 0.86
PHOX2BQ99453 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 AC073195.1-201ENST00000607241 877 ntBASIC20.43■□□□□ 0.86
PHOX2BQ99453 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms