Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 NOC2LP1-202ENST00000452600 2235 ntBASIC19.03■□□□□ 0.64
NR1H4Q96RI1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
NR1H4Q96RI1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 AL031848.2-201ENST00000607670 837 ntBASIC19.02■□□□□ 0.64
NR1H4Q96RI1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NR1H4Q96RI1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H4Q96RI1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H4Q96RI1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H4Q96RI1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H4Q96RI1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 TMEM179-206ENST00000616017 1645 ntBASIC19.01■□□□□ 0.63
NR1H4Q96RI1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 AL034346.1-201ENST00000568244 1277 ntBASIC19.01■□□□□ 0.63
NR1H4Q96RI1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H4Q96RI1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19■□□□□ 0.63
NR1H4Q96RI1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19■□□□□ 0.63
NR1H4Q96RI1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19■□□□□ 0.63
NR1H4Q96RI1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19■□□□□ 0.63
NR1H4Q96RI1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19■□□□□ 0.63
NR1H4Q96RI1 SNX5-217ENST00000606557 1087 ntBASIC19■□□□□ 0.63
NR1H4Q96RI1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NR1H4Q96RI1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NR1H4Q96RI1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 AL390961.4-201ENST00000623958 2535 ntBASIC19■□□□□ 0.63
NR1H4Q96RI1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19■□□□□ 0.63
NR1H4Q96RI1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H4Q96RI1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NR1H4Q96RI1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
NR1H4Q96RI1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms