Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 AL356740.2-201ENST00000601559 647 ntBASIC15.24■□□□□ 0.03
AP1S3Q96PC3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S3Q96PC3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 AP006587.3-201ENST00000525742 1516 ntBASIC15.22■□□□□ 0.03
AP1S3Q96PC3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 OR6D1P-203ENST00000641209 4860 ntBASIC15.22■□□□□ 0.03
AP1S3Q96PC3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S3Q96PC3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 RARRES2P1-201ENST00000474487 481 ntBASIC15.21■□□□□ 0.03
AP1S3Q96PC3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S3Q96PC3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms