Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DPP3P2-201ENST00000416030 1696 ntBASIC21.34■■□□□ 1.01
CALR3Q96L12 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.34■■□□□ 1.01
CALR3Q96L12 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.34■■□□□ 1.01
CALR3Q96L12 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CALR3Q96L12 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.34■■□□□ 1.01
CALR3Q96L12 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.34■■□□□ 1.01
CALR3Q96L12 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.34■■□□□ 1.01
CALR3Q96L12 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CALR3Q96L12 KRT18P14-201ENST00000534205 1250 ntBASIC21.34■■□□□ 1.01
CALR3Q96L12 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.34■■□□□ 1.01
CALR3Q96L12 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.34■■□□□ 1.01
CALR3Q96L12 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.34■■□□□ 1.01
CALR3Q96L12 BX119927.1-201ENST00000636596 1552 ntBASIC21.34■■□□□ 1.01
CALR3Q96L12 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CALR3Q96L12 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.33■■□□□ 1.01
CALR3Q96L12 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.33■■□□□ 1.01
CALR3Q96L12 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.33■■□□□ 1.01
CALR3Q96L12 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CALR3Q96L12 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CALR3Q96L12 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CALR3Q96L12 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CALR3Q96L12 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CALR3Q96L12 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.33■■□□□ 1
CALR3Q96L12 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.32■■□□□ 1
CALR3Q96L12 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CALR3Q96L12 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
CALR3Q96L12 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 AC004854.2-201ENST00000608450 1441 ntBASIC21.31■■□□□ 1
CALR3Q96L12 BX323043.1-201ENST00000641006 1765 ntBASIC21.31■■□□□ 1
CALR3Q96L12 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.31■■□□□ 1
CALR3Q96L12 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
CALR3Q96L12 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CALR3Q96L12 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.31■■□□□ 1
CALR3Q96L12 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.31■■□□□ 1
CALR3Q96L12 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.31■■□□□ 1
CALR3Q96L12 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CALR3Q96L12 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.31■■□□□ 1
CALR3Q96L12 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.31■■□□□ 1
CALR3Q96L12 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.31■■□□□ 1
CALR3Q96L12 AC087633.2-202ENST00000565166 1439 ntBASIC21.3■■□□□ 1
CALR3Q96L12 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.3■■□□□ 1
CALR3Q96L12 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.3■■□□□ 1
CALR3Q96L12 AL162412.1-201ENST00000567129 965 ntBASIC21.3■■□□□ 1
CALR3Q96L12 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.3■■□□□ 1
CALR3Q96L12 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CALR3Q96L12 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CALR3Q96L12 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.3■■□□□ 1
CALR3Q96L12 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.3■■□□□ 1
CALR3Q96L12 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CALR3Q96L12 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms