Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 FP700111.2-201ENST00000619190 1892 ntBASIC20.75■□□□□ 0.91
IFT43Q96FT9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 MKRN4P-201ENST00000444706 1521 ntBASIC20.74■□□□□ 0.91
IFT43Q96FT9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 FAM21FP-204ENST00000608637 956 ntBASIC20.74■□□□□ 0.91
IFT43Q96FT9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT43Q96FT9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT43Q96FT9 AC027702.1-201ENST00000563810 1770 ntBASIC20.74■□□□□ 0.91
IFT43Q96FT9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT43Q96FT9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFT43Q96FT9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 AC007225.1-201ENST00000566331 1836 ntBASIC20.74■□□□□ 0.91
IFT43Q96FT9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.74■□□□□ 0.91
IFT43Q96FT9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 MIPEPP3-201ENST00000412105 444 ntBASIC20.73■□□□□ 0.91
IFT43Q96FT9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
IFT43Q96FT9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
IFT43Q96FT9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.72■□□□□ 0.91
IFT43Q96FT9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFT43Q96FT9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms