Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZNF428Q96B54 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZNF428Q96B54 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
ZNF428Q96B54 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.03■■□□□ 1.76
ZNF428Q96B54 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.03■■□□□ 1.76
ZNF428Q96B54 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.03■■□□□ 1.76
ZNF428Q96B54 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZNF428Q96B54 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.03■■□□□ 1.76
ZNF428Q96B54 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZNF428Q96B54 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
ZNF428Q96B54 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZNF428Q96B54 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 AL158047.1-201ENST00000445918 881 ntBASIC26.01■■□□□ 1.75
ZNF428Q96B54 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.01■■□□□ 1.75
ZNF428Q96B54 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
ZNF428Q96B54 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF428Q96B54 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26■■□□□ 1.75
ZNF428Q96B54 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC26■■□□□ 1.75
ZNF428Q96B54 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZNF428Q96B54 AC128676.1-201ENST00000454392 318 ntBASIC26■■□□□ 1.75
ZNF428Q96B54 C2orf69P4-201ENST00000565394 541 ntBASIC26■■□□□ 1.75
ZNF428Q96B54 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
ZNF428Q96B54 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
ZNF428Q96B54 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZNF428Q96B54 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZNF428Q96B54 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
ZNF428Q96B54 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.99■■□□□ 1.75
ZNF428Q96B54 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 AL157384.1-201ENST00000445995 2473 ntBASIC25.99■■□□□ 1.75
ZNF428Q96B54 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.99■■□□□ 1.75
ZNF428Q96B54 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 LINC01006-201ENST00000333319 2292 ntBASIC25.99■■□□□ 1.75
ZNF428Q96B54 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.99■■□□□ 1.75
ZNF428Q96B54 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.99■■□□□ 1.75
ZNF428Q96B54 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF428Q96B54 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZNF428Q96B54 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ZNF428Q96B54 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ZNF428Q96B54 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZNF428Q96B54 UNC93B5-201ENST00000530315 699 ntBASIC25.98■■□□□ 1.75
ZNF428Q96B54 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ZNF428Q96B54 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.98■■□□□ 1.75
ZNF428Q96B54 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ZNF428Q96B54 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.97■■□□□ 1.75
ZNF428Q96B54 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZNF428Q96B54 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.97■■□□□ 1.75
ZNF428Q96B54 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.97■■□□□ 1.75
ZNF428Q96B54 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms