Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 AL390719.1-204ENST00000412397 1219 ntBASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3RF2Q8TEC5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.02■□□□□ 0.95
SH3RF2Q8TEC5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3RF2Q8TEC5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 RER1-204ENST00000378518 522 ntTSL 3 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 MTDHP1-201ENST00000605323 784 ntBASIC21■□□□□ 0.95
SH3RF2Q8TEC5 MIR2861-201ENST00000636310 90 ntBASIC21■□□□□ 0.95
SH3RF2Q8TEC5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 AC121338.2-201ENST00000622535 1744 ntBASIC21■□□□□ 0.95
SH3RF2Q8TEC5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SH3RF2Q8TEC5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 KRT8P36-201ENST00000489121 1440 ntBASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3RF2Q8TEC5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3RF2Q8TEC5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms