Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 AC007322.3-201ENST00000426526 701 ntBASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 CCDC92B-201ENST00000575506 885 ntBASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4Y2Q8TD47 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 KRT18P20-201ENST00000548986 1279 ntBASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 MIR6084-201ENST00000622012 110 ntBASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4Y2Q8TD47 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 RBM17P2-201ENST00000616397 1405 ntBASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 AP001160.3-201ENST00000601484 763 ntBASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS4Y2Q8TD47 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms