Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 AC083906.2-201ENST00000511578 360 ntBASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 CYP21A1P-202ENST00000354927 1481 ntBASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 AC010980.2-201ENST00000587099 1412 ntBASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLL1Q8TB92 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 GPX1P1-201ENST00000388829 606 ntBASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 MCRIP2P1-201ENST00000394346 511 ntBASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 AC093787.1-201ENST00000450396 207 ntBASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 AC105036.2-201ENST00000569468 176 ntBASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 RNF165-205ENST00000588679 2904 ntBASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCLL1Q8TB92 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 GUSBP6-202ENST00000438529 1198 ntBASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCLL1Q8TB92 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCLL1Q8TB92 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 TSPY6P-201ENST00000448518 926 ntBASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCLL1Q8TB92 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 CYP2T3P-201ENST00000601990 817 ntBASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCLL1Q8TB92 AC087633.2-202ENST00000565166 1439 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms