Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 AP000525.1-201ENST00000608286 694 ntBASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNIP1Q8TAD8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 KRT18P22-201ENST00000402024 1347 ntBASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 AL137013.1-201ENST00000432946 1228 ntBASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 AL356652.1-201ENST00000615962 565 ntBASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNIP1Q8TAD8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 AC073508.3-201ENST00000619697 1419 ntBASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 MIR1238-201ENST00000408483 83 ntBASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 NAPSB-206ENST00000562112 1266 ntBASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.1■□□□□ 0.65
SNIP1Q8TAD8 NBPF21P-201ENST00000425093 1451 ntBASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 DUX4L26-201ENST00000489078 1255 ntBASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 NTF6B-201ENST00000591913 560 ntBASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNIP1Q8TAD8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.08■□□□□ 0.65
SNIP1Q8TAD8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.08■□□□□ 0.64
SNIP1Q8TAD8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms