Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF169Q8NCN4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 AC239809.2-201ENST00000415381 517 ntBASIC22.03■■□□□ 1.12
RNF169Q8NCN4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 MTDHP1-201ENST00000605323 784 ntBASIC22.03■■□□□ 1.12
RNF169Q8NCN4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF169Q8NCN4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 SNORA78-201ENST00000459373 127 ntBASIC22.02■■□□□ 1.12
RNF169Q8NCN4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RNF169Q8NCN4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
RNF169Q8NCN4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF169Q8NCN4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF169Q8NCN4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 KRASP1-201ENST00000407852 552 ntBASIC22■■□□□ 1.11
RNF169Q8NCN4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22■■□□□ 1.11
RNF169Q8NCN4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF169Q8NCN4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22■■□□□ 1.11
RNF169Q8NCN4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22■■□□□ 1.11
RNF169Q8NCN4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF169Q8NCN4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
RNF169Q8NCN4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF169Q8NCN4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RNF169Q8NCN4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF169Q8NCN4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms