Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KDM1BQ8NB78 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
KDM1BQ8NB78 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KDM1BQ8NB78 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 AC073648.6-201ENST00000641589 218 ntBASIC20.65■□□□□ 0.9
KDM1BQ8NB78 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
KDM1BQ8NB78 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KDM1BQ8NB78 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 AC066615.1-201ENST00000640911 628 ntBASIC20.64■□□□□ 0.89
KDM1BQ8NB78 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KDM1BQ8NB78 LINC01006-201ENST00000333319 2292 ntBASIC20.64■□□□□ 0.89
KDM1BQ8NB78 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 KRT17P3-201ENST00000420566 1262 ntBASIC20.63■□□□□ 0.89
KDM1BQ8NB78 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 GCSHP5-201ENST00000443090 522 ntBASIC20.63■□□□□ 0.89
KDM1BQ8NB78 AC098590.1-201ENST00000468126 897 ntBASIC20.63■□□□□ 0.89
KDM1BQ8NB78 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 MIR2861-201ENST00000636310 90 ntBASIC20.63■□□□□ 0.89
KDM1BQ8NB78 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.63■□□□□ 0.89
KDM1BQ8NB78 KRT8P36-201ENST00000489121 1440 ntBASIC20.62■□□□□ 0.89
KDM1BQ8NB78 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 SOX15-203ENST00000570788 1093 ntBASIC20.62■□□□□ 0.89
KDM1BQ8NB78 AC005829.2-201ENST00000571422 1056 ntBASIC20.62■□□□□ 0.89
KDM1BQ8NB78 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 FEM1AP1-201ENST00000431297 1995 ntBASIC20.62■□□□□ 0.89
KDM1BQ8NB78 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM1BQ8NB78 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms