Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNX31Q8N9S9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNX31Q8N9S9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX31Q8N9S9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 AC016769.1-201ENST00000409132 1010 ntBASIC19.88■□□□□ 0.77
SNX31Q8N9S9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNX31Q8N9S9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 CDV3P1-201ENST00000471403 739 ntBASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 AC010536.3-201ENST00000620306 533 ntBASIC19.87■□□□□ 0.77
SNX31Q8N9S9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX31Q8N9S9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 AC099778.1-201ENST00000568593 1911 ntBASIC19.86■□□□□ 0.77
SNX31Q8N9S9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 KRT18P11-201ENST00000435214 1283 ntBASIC19.86■□□□□ 0.77
SNX31Q8N9S9 TERF1P5-201ENST00000477545 1207 ntBASIC19.86■□□□□ 0.77
SNX31Q8N9S9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.86■□□□□ 0.77
SNX31Q8N9S9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX31Q8N9S9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms