Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 SMG8-203ENST00000578922 2178 ntBASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CDRT4Q8N9R6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 AC093787.1-201ENST00000450396 207 ntBASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 RAP2CP1-201ENST00000605103 478 ntBASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 AL589743.5-201ENST00000616611 1050 ntBASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDRT4Q8N9R6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDRT4Q8N9R6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 MIR663A-201ENST00000385250 93 ntBASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 AL355472.2-201ENST00000422958 438 ntBASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 AF201337.1-201ENST00000520239 748 ntBASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDRT4Q8N9R6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDRT4Q8N9R6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 AC099778.1-201ENST00000568593 1911 ntBASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.76■□□□□ 0.59
CDRT4Q8N9R6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms