Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC89Q8N998 AC007322.3-201ENST00000426526 701 ntBASIC20.93■□□□□ 0.94
CCDC89Q8N998 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC89Q8N998 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC89Q8N998 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC89Q8N998 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC89Q8N998 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC89Q8N998 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC89Q8N998 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC89Q8N998 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 AC091799.1-201ENST00000422823 811 ntBASIC20.92■□□□□ 0.94
CCDC89Q8N998 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 SLC7A5P1-201ENST00000568957 537 ntBASIC20.92■□□□□ 0.94
CCDC89Q8N998 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC89Q8N998 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC89Q8N998 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 KRT19P1-201ENST00000405746 1186 ntBASIC20.91■□□□□ 0.94
CCDC89Q8N998 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC89Q8N998 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC89Q8N998 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 AC019069.1-201ENST00000610008 1333 ntBASIC20.9■□□□□ 0.94
CCDC89Q8N998 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC89Q8N998 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC89Q8N998 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC89Q8N998 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC89Q8N998 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC89Q8N998 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC89Q8N998 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC89Q8N998 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC89Q8N998 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC89Q8N998 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 ZNRF2P3-201ENST00000424200 374 ntBASIC20.89■□□□□ 0.93
CCDC89Q8N998 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC89Q8N998 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC89Q8N998 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms