Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 C2orf69P3-201ENST00000565542 1120 ntBASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RP1L1Q8IWN7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 UPK3BP1-201ENST00000428678 509 ntBASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AL355355.2-201ENST00000442321 338 ntBASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AC124283.5-201ENST00000624661 1809 ntBASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.3■□□□□ 0.52
RP1L1Q8IWN7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 AF186192.3-201ENST00000583427 947 ntBASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 AC026471.5-201ENST00000615068 467 ntBASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
RP1L1Q8IWN7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 NBPF21P-201ENST00000425093 1451 ntBASIC18.28■□□□□ 0.52
RP1L1Q8IWN7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 AC116050.2-201ENST00000612102 1779 ntBASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RP1L1Q8IWN7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms