Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.94■□□□□ 0.78
APLFQ8IW19 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
APLFQ8IW19 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
APLFQ8IW19 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APLFQ8IW19 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
APLFQ8IW19 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.93■□□□□ 0.78
APLFQ8IW19 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.93■□□□□ 0.78
APLFQ8IW19 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.93■□□□□ 0.78
APLFQ8IW19 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.93■□□□□ 0.78
APLFQ8IW19 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APLFQ8IW19 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
APLFQ8IW19 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.93■□□□□ 0.78
APLFQ8IW19 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
APLFQ8IW19 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
APLFQ8IW19 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APLFQ8IW19 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.93■□□□□ 0.78
APLFQ8IW19 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APLFQ8IW19 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 AC005082.1-201ENST00000413042 2259 ntBASIC19.92■□□□□ 0.78
APLFQ8IW19 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
APLFQ8IW19 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.92■□□□□ 0.78
APLFQ8IW19 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
APLFQ8IW19 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
APLFQ8IW19 AC073210.2-201ENST00000430369 194 ntBASIC19.92■□□□□ 0.78
APLFQ8IW19 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
APLFQ8IW19 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.92■□□□□ 0.78
APLFQ8IW19 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APLFQ8IW19 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
APLFQ8IW19 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.91■□□□□ 0.78
APLFQ8IW19 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
APLFQ8IW19 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
APLFQ8IW19 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.91■□□□□ 0.78
APLFQ8IW19 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 TSPY20P-201ENST00000450910 630 ntBASIC19.91■□□□□ 0.78
APLFQ8IW19 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
APLFQ8IW19 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.91■□□□□ 0.78
APLFQ8IW19 AC138907.5-202ENST00000569484 235 ntBASIC19.91■□□□□ 0.78
APLFQ8IW19 AC133552.2-202ENST00000575694 574 ntBASIC19.91■□□□□ 0.78
APLFQ8IW19 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.91■□□□□ 0.78
APLFQ8IW19 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
APLFQ8IW19 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.91■□□□□ 0.78
APLFQ8IW19 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APLFQ8IW19 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.91■□□□□ 0.78
APLFQ8IW19 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
APLFQ8IW19 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 CNN2P6-201ENST00000439038 900 ntBASIC19.9■□□□□ 0.78
APLFQ8IW19 AC010141.2-201ENST00000452426 721 ntBASIC19.9■□□□□ 0.78
APLFQ8IW19 AF201337.1-201ENST00000520239 748 ntBASIC19.9■□□□□ 0.78
APLFQ8IW19 AC079089.2-201ENST00000531211 1277 ntBASIC19.9■□□□□ 0.78
APLFQ8IW19 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.9■□□□□ 0.78
APLFQ8IW19 AL138781.1-201ENST00000566567 1274 ntBASIC19.9■□□□□ 0.78
APLFQ8IW19 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.9■□□□□ 0.78
APLFQ8IW19 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
APLFQ8IW19 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.9■□□□□ 0.78
APLFQ8IW19 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APLFQ8IW19 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms