Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 MIR2861-201ENST00000636310 90 ntBASIC20.81■□□□□ 0.92
CCDC25Q86WR0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC25Q86WR0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AL020996.1-203ENST00000536896 2307 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AC012414.1-201ENST00000556676 535 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AF213884.3-201ENST00000563833 479 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 RASA4CP-201ENST00000424092 1398 ntBASIC20.8■□□□□ 0.92
CCDC25Q86WR0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC25Q86WR0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 AC079140.4-201ENST00000507448 529 ntBASIC20.79■□□□□ 0.92
CCDC25Q86WR0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC25Q86WR0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 EDA-201ENST00000338901 1233 ntBASIC20.78■□□□□ 0.92
CCDC25Q86WR0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 AC106739.1-201ENST00000617035 715 ntBASIC20.78■□□□□ 0.92
CCDC25Q86WR0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC25Q86WR0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC25Q86WR0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms