Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM4Q86VH4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 AC092720.2-201ENST00000602388 1665 ntBASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRTM4Q86VH4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 AL390719.1-204ENST00000412397 1219 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 AP003097.1-201ENST00000530657 1135 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 SOX15-203ENST00000570788 1093 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 AC005829.2-201ENST00000571422 1056 ntBASIC19.83■□□□□ 0.77
LRRTM4Q86VH4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRTM4Q86VH4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 AC026366.1-201ENST00000488803 879 ntBASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 AC023632.3-201ENST00000521633 145 ntBASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRTM4Q86VH4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM4Q86VH4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms