Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 WWOX-216ENST00000569818 525 ntBASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 AL356652.1-201ENST00000615962 565 ntBASIC14.17□□□□□ -0.14
CSMD3Q7Z407 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSMD3Q7Z407 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 AL137013.1-201ENST00000432946 1228 ntBASIC14.16□□□□□ -0.14
CSMD3Q7Z407 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 AC027702.1-201ENST00000563810 1770 ntBASIC14.16□□□□□ -0.14
CSMD3Q7Z407 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSMD3Q7Z407 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 AC116562.2-201ENST00000507042 360 ntBASIC14.15□□□□□ -0.14
CSMD3Q7Z407 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 KRT18P56-201ENST00000507275 550 ntBASIC14.15□□□□□ -0.14
CSMD3Q7Z407 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CSMD3Q7Z407 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 INGX-201ENST00000359239 846 ntBASIC14.14□□□□□ -0.15
CSMD3Q7Z407 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 KRT16P1-201ENST00000399124 1418 ntBASIC14.14□□□□□ -0.15
CSMD3Q7Z407 AL031133.1-201ENST00000406807 723 ntBASIC14.14□□□□□ -0.15
CSMD3Q7Z407 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 AC087388.1-201ENST00000571370 1112 ntBASIC14.14□□□□□ -0.15
CSMD3Q7Z407 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.14□□□□□ -0.15
CSMD3Q7Z407 AL031963.3-201ENST00000606441 850 ntBASIC14.14□□□□□ -0.15
CSMD3Q7Z407 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms