Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 AL031963.3-201ENST00000606441 850 ntBASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNKSR3Q6P9H4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 AC005521.1-201ENST00000393351 872 ntBASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 MIR2861-201ENST00000636310 90 ntBASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR3Q6P9H4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 MIR1238-201ENST00000408483 83 ntBASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CNKSR3Q6P9H4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 LINC01568-207ENST00000641790 1380 ntBASIC21.87■■□□□ 1.09
CNKSR3Q6P9H4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 AC113347.1-201ENST00000413321 391 ntBASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNKSR3Q6P9H4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 NAPSB-206ENST00000562112 1266 ntBASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.85■■□□□ 1.09
CNKSR3Q6P9H4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 KSR1P1-201ENST00000446298 240 ntBASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 AC116562.2-201ENST00000507042 360 ntBASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 GUSBP5-202ENST00000510805 1989 ntBASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms