Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF213Q63HN8 C2orf69P3-201ENST00000565542 1120 ntBASIC10.91□□□□□ -0.66
RNF213Q63HN8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
RNF213Q63HN8 IL9RP2-201ENST00000423948 1312 ntBASIC10.9□□□□□ -0.66
RNF213Q63HN8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
RNF213Q63HN8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.9□□□□□ -0.66
RNF213Q63HN8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 AC005104.2-201ENST00000427818 678 ntBASIC10.9□□□□□ -0.66
RNF213Q63HN8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
RNF213Q63HN8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 AC106795.1-205ENST00000512851 1056 ntBASIC10.9□□□□□ -0.66
RNF213Q63HN8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
RNF213Q63HN8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC10.9□□□□□ -0.66
RNF213Q63HN8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF213Q63HN8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RNF213Q63HN8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
RNF213Q63HN8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RNF213Q63HN8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
RNF213Q63HN8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RNF213Q63HN8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RNF213Q63HN8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
RNF213Q63HN8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 DGCR10-201ENST00000609839 495 ntBASIC10.89□□□□□ -0.67
RNF213Q63HN8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 CYP21A1P-202ENST00000354927 1481 ntBASIC10.89□□□□□ -0.67
RNF213Q63HN8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 RER1-204ENST00000378518 522 ntTSL 3 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 AC083849.1-201ENST00000615227 514 ntBASIC10.89□□□□□ -0.67
RNF213Q63HN8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 MRPL3P1-201ENST00000400109 1033 ntBASIC10.89□□□□□ -0.67
RNF213Q63HN8 CDV3P1-201ENST00000471403 739 ntBASIC10.89□□□□□ -0.67
RNF213Q63HN8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RNF213Q63HN8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
RNF213Q63HN8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 AC007322.3-201ENST00000426526 701 ntBASIC10.88□□□□□ -0.67
RNF213Q63HN8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 NPAP1P7-201ENST00000613027 823 ntBASIC10.88□□□□□ -0.67
RNF213Q63HN8 AC055717.3-201ENST00000622967 595 ntBASIC10.88□□□□□ -0.67
RNF213Q63HN8 AL031985.4-201ENST00000642138 673 ntBASIC10.88□□□□□ -0.67
RNF213Q63HN8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 NIFKP9-201ENST00000419265 221 ntBASIC10.88□□□□□ -0.67
RNF213Q63HN8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RNF213Q63HN8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RNF213Q63HN8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms