Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDKAL1Q5VV42 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDKAL1Q5VV42 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.16■■□□□ 1.14
CDKAL1Q5VV42 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDKAL1Q5VV42 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 ZNRF2P3-201ENST00000424200 374 ntBASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKAL1Q5VV42 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDKAL1Q5VV42 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
CDKAL1Q5VV42 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDKAL1Q5VV42 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 AL356652.1-201ENST00000615962 565 ntBASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDKAL1Q5VV42 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKAL1Q5VV42 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 TREX1-205ENST00000625293 1783 ntBASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDKAL1Q5VV42 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 CYP21A1P-202ENST00000354927 1481 ntBASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKAL1Q5VV42 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.1■■□□□ 1.13
CDKAL1Q5VV42 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDKAL1Q5VV42 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms