Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC38Q5VT99 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.02■□□□□ 0.95
LRRC38Q5VT99 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC38Q5VT99 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC38Q5VT99 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC38Q5VT99 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC38Q5VT99 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.01■□□□□ 0.95
LRRC38Q5VT99 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC38Q5VT99 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRRC38Q5VT99 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21■□□□□ 0.95
LRRC38Q5VT99 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRRC38Q5VT99 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRRC38Q5VT99 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 AC011767.1-201ENST00000617410 1153 ntBASIC21■□□□□ 0.95
LRRC38Q5VT99 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC38Q5VT99 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21■□□□□ 0.95
LRRC38Q5VT99 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC38Q5VT99 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 PTBP1P-201ENST00000554374 1601 ntBASIC20.98■□□□□ 0.95
LRRC38Q5VT99 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 AL691432.2-201ENST00000607222 2038 ntBASIC20.98■□□□□ 0.95
LRRC38Q5VT99 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC38Q5VT99 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms