Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 C2orf69P4-201ENST00000565394 541 ntBASIC17.81■□□□□ 0.44
FREM1Q5H8C1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FREM1Q5H8C1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 AC006058.3-201ENST00000606217 1069 ntBASIC17.8■□□□□ 0.44
FREM1Q5H8C1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FREM1Q5H8C1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FREM1Q5H8C1 AC233263.1-201ENST00000578059 224 ntBASIC17.79■□□□□ 0.44
FREM1Q5H8C1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms