Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 AC005229.4-201ENST00000610085 2198 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 DUX4L9-201ENST00000449051 1259 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 STK32C-205ENST00000456004 607 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 AC139795.1-202ENST00000500444 432 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 MIR4449-201ENST00000578365 66 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 ALDH1A3-203ENST00000557963 1670 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 RNF126P1-201ENST00000567452 1320 ntBASIC10.13□□□□□ -0.79
LINC01554Q52M75 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SPCS2P3-201ENST00000500401 656 ntBASIC10.13□□□□□ -0.79
LINC01554Q52M75 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 BHLHE23-202ENST00000612929 1109 ntBASIC10.13□□□□□ -0.79
LINC01554Q52M75 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC01554Q52M75 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC01554Q52M75 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01554Q52M75 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
LINC01554Q52M75 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms