Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTC1Q2NKJ3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CTC1Q2NKJ3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTC1Q2NKJ3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.66■■□□□ 1.06
CTC1Q2NKJ3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 AC010542.4-201ENST00000563151 1910 ntBASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTC1Q2NKJ3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 AC005229.4-201ENST00000610085 2198 ntBASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CTC1Q2NKJ3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.64■■□□□ 1.05
CTC1Q2NKJ3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 ARMC10P1-201ENST00000313754 855 ntBASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTC1Q2NKJ3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CTC1Q2NKJ3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms