Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDK3Q00526 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK3Q00526 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDK3Q00526 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK3Q00526 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDK3Q00526 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDK3Q00526 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK3Q00526 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.93■□□□□ 0.78
CDK3Q00526 KRT17P3-201ENST00000420566 1262 ntBASIC19.93■□□□□ 0.78
CDK3Q00526 POM121L13P-201ENST00000422362 380 ntBASIC19.93■□□□□ 0.78
CDK3Q00526 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.93■□□□□ 0.78
CDK3Q00526 AC023632.3-201ENST00000521633 145 ntBASIC19.93■□□□□ 0.78
CDK3Q00526 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.93■□□□□ 0.78
CDK3Q00526 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK3Q00526 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK3Q00526 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
CDK3Q00526 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK3Q00526 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK3Q00526 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK3Q00526 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK3Q00526 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK3Q00526 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK3Q00526 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.91■□□□□ 0.78
CDK3Q00526 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDK3Q00526 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.91■□□□□ 0.78
CDK3Q00526 AC098590.1-201ENST00000468126 897 ntBASIC19.91■□□□□ 0.78
CDK3Q00526 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDK3Q00526 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.91■□□□□ 0.78
CDK3Q00526 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.91■□□□□ 0.78
CDK3Q00526 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK3Q00526 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK3Q00526 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK3Q00526 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK3Q00526 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK3Q00526 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDK3Q00526 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.9■□□□□ 0.78
CDK3Q00526 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 AC069544.1-201ENST00000609399 999 ntBASIC19.9■□□□□ 0.78
CDK3Q00526 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDK3Q00526 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 PTBP1P-201ENST00000554374 1601 ntBASIC19.9■□□□□ 0.78
CDK3Q00526 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK3Q00526 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK3Q00526 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK3Q00526 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK3Q00526 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDK3Q00526 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDK3Q00526 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDK3Q00526 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 AC233263.1-201ENST00000578059 224 ntBASIC19.89■□□□□ 0.77
CDK3Q00526 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 AC120498.8-201ENST00000614275 531 ntBASIC19.89■□□□□ 0.77
CDK3Q00526 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK3Q00526 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK3Q00526 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK3Q00526 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms