Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SIRPAP78324 AL512625.2-201ENST00000417533 625 ntBASIC18.4■□□□□ 0.54
SIRPAP78324 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.4■□□□□ 0.54
SIRPAP78324 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.4■□□□□ 0.54
SIRPAP78324 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.4■□□□□ 0.54
SIRPAP78324 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.4■□□□□ 0.54
SIRPAP78324 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPAP78324 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPAP78324 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIRPAP78324 AC027702.1-201ENST00000563810 1770 ntBASIC18.4■□□□□ 0.54
SIRPAP78324 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
SIRPAP78324 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SIRPAP78324 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SIRPAP78324 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPAP78324 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPAP78324 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 CD99P1-205ENST00000527459 561 ntBASIC18.39■□□□□ 0.53
SIRPAP78324 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.39■□□□□ 0.53
SIRPAP78324 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.39■□□□□ 0.53
SIRPAP78324 AC007225.1-201ENST00000566331 1836 ntBASIC18.39■□□□□ 0.53
SIRPAP78324 AC010980.2-201ENST00000587099 1412 ntBASIC18.39■□□□□ 0.53
SIRPAP78324 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.39■□□□□ 0.53
SIRPAP78324 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIRPAP78324 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.38■□□□□ 0.53
SIRPAP78324 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIRPAP78324 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SIRPAP78324 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.38■□□□□ 0.53
SIRPAP78324 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 AL391422.3-201ENST00000603791 2761 ntBASIC18.37■□□□□ 0.53
SIRPAP78324 AC020907.5-201ENST00000624372 1936 ntBASIC18.37■□□□□ 0.53
SIRPAP78324 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 AL355472.2-201ENST00000422958 438 ntBASIC18.37■□□□□ 0.53
SIRPAP78324 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.37■□□□□ 0.53
SIRPAP78324 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.37■□□□□ 0.53
SIRPAP78324 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.37■□□□□ 0.53
SIRPAP78324 KRT18P6-201ENST00000555540 1265 ntBASIC18.37■□□□□ 0.53
SIRPAP78324 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.37■□□□□ 0.53
SIRPAP78324 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPAP78324 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.37■□□□□ 0.53
SIRPAP78324 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPAP78324 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SIRPAP78324 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPAP78324 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIRPAP78324 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.36■□□□□ 0.53
SIRPAP78324 AC007322.3-201ENST00000426526 701 ntBASIC18.36■□□□□ 0.53
SIRPAP78324 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.36■□□□□ 0.53
SIRPAP78324 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIRPAP78324 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPAP78324 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SIRPAP78324 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.36■□□□□ 0.53
SIRPAP78324 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms