Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC020907.5-201ENST00000624372 1936 ntBASIC20.37■□□□□ 0.85
AP1S1P61966 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S1P61966 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.36■□□□□ 0.85
AP1S1P61966 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.36■□□□□ 0.85
AP1S1P61966 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 DPP3P2-201ENST00000416030 1696 ntBASIC20.36■□□□□ 0.85
AP1S1P61966 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.36■□□□□ 0.85
AP1S1P61966 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.36■□□□□ 0.85
AP1S1P61966 RNA5SP413-201ENST00000516373 109 ntBASIC20.36■□□□□ 0.85
AP1S1P61966 CD99P1-205ENST00000527459 561 ntBASIC20.36■□□□□ 0.85
AP1S1P61966 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.36■□□□□ 0.85
AP1S1P61966 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.36■□□□□ 0.85
AP1S1P61966 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S1P61966 AP005212.1-201ENST00000581547 1997 ntBASIC20.35■□□□□ 0.85
AP1S1P61966 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
AP1S1P61966 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.35■□□□□ 0.85
AP1S1P61966 PTBP1P-201ENST00000554374 1601 ntBASIC20.35■□□□□ 0.85
AP1S1P61966 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.35■□□□□ 0.85
AP1S1P61966 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.35■□□□□ 0.85
AP1S1P61966 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.35■□□□□ 0.85
AP1S1P61966 PNMA6B-201ENST00000538162 1200 ntBASIC20.35■□□□□ 0.85
AP1S1P61966 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.35■□□□□ 0.85
AP1S1P61966 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
AP1S1P61966 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
AP1S1P61966 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.35■□□□□ 0.85
AP1S1P61966 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S1P61966 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
AP1S1P61966 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AP1S1P61966 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.34■□□□□ 0.85
AP1S1P61966 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AP1S1P61966 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S1P61966 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S1P61966 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
AP1S1P61966 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
AP1S1P61966 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.33■□□□□ 0.85
AP1S1P61966 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP1S1P61966 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.33■□□□□ 0.85
AP1S1P61966 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.33■□□□□ 0.85
AP1S1P61966 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP1S1P61966 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S1P61966 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.33■□□□□ 0.85
AP1S1P61966 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.33■□□□□ 0.85
AP1S1P61966 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.33■□□□□ 0.84
AP1S1P61966 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S1P61966 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S1P61966 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S1P61966 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S1P61966 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.33■□□□□ 0.84
AP1S1P61966 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
AP1S1P61966 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S1P61966 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.33■□□□□ 0.84
AP1S1P61966 GABARAPL3-202ENST00000624044 1851 ntBASIC20.33■□□□□ 0.84
AP1S1P61966 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.32■□□□□ 0.84
AP1S1P61966 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
AP1S1P61966 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms