Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.45■□□□□ 0.86
WNT3AP56704 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
WNT3AP56704 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
WNT3AP56704 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
WNT3AP56704 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
WNT3AP56704 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.45■□□□□ 0.86
WNT3AP56704 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.45■□□□□ 0.86
WNT3AP56704 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.45■□□□□ 0.86
WNT3AP56704 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.45■□□□□ 0.86
WNT3AP56704 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.45■□□□□ 0.86
WNT3AP56704 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.45■□□□□ 0.86
WNT3AP56704 AL589743.5-201ENST00000616611 1050 ntBASIC20.45■□□□□ 0.86
WNT3AP56704 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
WNT3AP56704 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
WNT3AP56704 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
WNT3AP56704 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
WNT3AP56704 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 MKRN4P-201ENST00000444706 1521 ntBASIC20.44■□□□□ 0.86
WNT3AP56704 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 AC083906.2-201ENST00000511578 360 ntBASIC20.44■□□□□ 0.86
WNT3AP56704 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.44■□□□□ 0.86
WNT3AP56704 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.44■□□□□ 0.86
WNT3AP56704 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.44■□□□□ 0.86
WNT3AP56704 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.44■□□□□ 0.86
WNT3AP56704 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
WNT3AP56704 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
WNT3AP56704 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
WNT3AP56704 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.44■□□□□ 0.86
WNT3AP56704 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.43■□□□□ 0.86
WNT3AP56704 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.43■□□□□ 0.86
WNT3AP56704 AL121832.2-201ENST00000610979 668 ntBASIC20.43■□□□□ 0.86
WNT3AP56704 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
WNT3AP56704 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
WNT3AP56704 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.43■□□□□ 0.86
WNT3AP56704 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 AL391422.3-201ENST00000603791 2761 ntBASIC20.42■□□□□ 0.86
WNT3AP56704 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.42■□□□□ 0.86
WNT3AP56704 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
WNT3AP56704 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
WNT3AP56704 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.42■□□□□ 0.86
WNT3AP56704 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
WNT3AP56704 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
WNT3AP56704 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.42■□□□□ 0.86
WNT3AP56704 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 AC099778.1-201ENST00000568593 1911 ntBASIC20.42■□□□□ 0.86
WNT3AP56704 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
WNT3AP56704 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.42■□□□□ 0.86
WNT3AP56704 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.42■□□□□ 0.86
WNT3AP56704 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
WNT3AP56704 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
WNT3AP56704 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.42■□□□□ 0.86
WNT3AP56704 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
WNT3AP56704 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.41■□□□□ 0.86
WNT3AP56704 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
WNT3AP56704 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
WNT3AP56704 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
WNT3AP56704 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
WNT3AP56704 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
WNT3AP56704 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
WNT3AP56704 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
WNT3AP56704 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms